STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR76WD repeat domain 76. (623 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.962
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.871
CUL4B
Cullin 4B.
    
 0.843
CUL4A
Cullin 4A.
    
 0.843
COPS2
COP9 signalosome subunit 2.
    
 0.834
RNF7
Ring finger protein 7.
    
 0.833
RBX1
Ring-box 1.
    
 0.833
COPS8
COP9 signalosome subunit 8.
    
 0.829
COPS4
COP9 signalosome subunit 4.
    
 0.828
RPA1
Replication protein A1.
    
 0.825
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.