STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACHD1Cache domain containing 1. (1223 aa)    
Predicted Functional Partners:
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
    
 0.820
SMPDL3B
Sphingomyelin phosphodiesterase acid like 3B.
      
 0.808
TMEM259
Transmembrane protein 259.
      
 0.808
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
    
 
 0.802
GGCX
Gamma-glutamyl carboxylase.
      
 0.796
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
    
 0.793
CACNB1
Calcium voltage-gated channel auxiliary subunit beta 1.
    
 0.793
CACNB3
Calcium voltage-gated channel auxiliary subunit beta 3.
    
 0.793
ENSPVAP00000013662
annotation not available
    
 0.793
CAPNS1
Calpain small subunit 1.
      
 0.782
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.