STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFEMP1EGF containing fibulin extracellular matrix protein 1. (496 aa)    
Predicted Functional Partners:
MFAP4
Microfibril associated protein 4.
   
 0.634
ELN
Elastin.
   
 0.634
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.612
EGFR
Epidermal growth factor receptor.
   
 0.606
ENSPVAP00000004817
annotation not available
    
 0.597
MFAP5
Microfibril associated protein 5.
   
 
 0.589
VTN
Vitronectin.
    
 0.587
CABLES1
Cdk5 and Abl enzyme substrate 1.
    
 
 0.587
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.570
ARID4A
AT-rich interaction domain 4A.
    
 0.569
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.