STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC93Coiled-coil domain containing 93. (614 aa)    
Predicted Functional Partners:
CCDC22
Coiled-coil domain containing 22.
    
 
 0.974
COMMD1
Copper metabolism domain containing 1.
   
 
 0.945
COMMD6
COMM domain containing 6.
   
 
 0.921
COMMD10
COMM domain containing 10.
    
 
 0.916
VPS26C
VPS26 endosomal protein sorting factor C.
    
 
 0.913
VPS29
VPS29 retromer complex component.
    
 
 0.905
COMMD9
COMM domain containing 9.
    
 
 0.904
COMMD8
COMM domain containing 8.
    
 
 0.869
VPS35L
VPS35 endosomal protein sorting factor like.
    
 
 0.858
DENND10
DENN domain containing 10.
    
 
 0.853
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.