STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FGD6FYVE, RhoGEF and PH domain containing 6. (1430 aa)    
Predicted Functional Partners:
GCSAM
Germinal center associated signaling and motility.
      
 0.769
MOCOS
Molybdenum cofactor sulfurase.
      
 0.700
POC1B
POC1 centriolar protein B.
      
 0.692
ARHGEF16
Rho guanine nucleotide exchange factor 16.
      
 0.692
ENSPVAP00000004436
annotation not available
    
 0.691
UPK3A
Uroplakin 3A.
      
 0.689
LYRM7
LYR motif containing 7.
      
 0.681
GIT1
GIT ArfGAP 1.
      
 0.674
RHOBTB1
Rho related BTB domain containing 1.
    
 0.662
DBN1
Drebrin 1.
    
 
 0.638
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.