STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD52Ankyrin repeat domain 52. (1072 aa)    
Predicted Functional Partners:
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.866
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
    
 0.845
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.769
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.769
NEDD8
NEDD8 ubiquitin like modifier.
    
  0.635
IFT81
Intraflagellar transport 81.
    
 0.633
ELOC
Elongin C.
    
  0.614
ENSPVAP00000010626
annotation not available
    
 0.613
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.603
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.603
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.