STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD2L1Polycystin 2 like 1, transient receptor potential cation channel. (804 aa)    
Predicted Functional Partners:
PKD1L3
Polycystin 1 like 3, transient receptor potential channel interacting.
    
0.992
ENSPVAP00000009395
annotation not available
    
0.934
PKD1
Polycystin 1, transient receptor potential channel interacting.
    
0.925
TAS1R2
Taste 1 receptor member 2.
      
 0.879
GNAT3
G protein subunit alpha transducin 3.
    
 
 0.822
TRPM5
Transient receptor potential cation channel subfamily M member 5.
      
 0.803
PLCB2
Phospholipase C beta 2.
      
 0.777
PRSS37
Serine protease 37.
      
 0.773
ENSPVAP00000002676
annotation not available
      
 0.769
ENSPVAP00000012277
annotation not available
      
 0.769
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.