STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRATLecithin retinol acyltransferase. (230 aa)    
Predicted Functional Partners:
RDH5
Retinol dehydrogenase 5.
     
 0.968
RBP1
Retinol binding protein 1.
     
 0.951
DEPDC1
DEP domain containing 1.
     
 0.950
RPE65
Retinoid isomerohydrolase RPE65.
     
 0.950
RDH12
Retinol dehydrogenase 12.
     
 0.949
RDH10
Retinol dehydrogenase 10.
     
 0.943
CYP26A1
Cytochrome P450 family 26 subfamily A member 1.
   
 
 0.943
RDH8
Retinol dehydrogenase 8.
     
 0.937
DHRS9
Dehydrogenase/reductase 9.
     
 0.931
ENSPVAP00000002262
annotation not available
     
 0.924
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.