STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYSMD3LysM domain containing 3. (306 aa)    
Predicted Functional Partners:
LYSMD2
LysM domain containing 2.
      
 0.773
ARL6IP1
ADP ribosylation factor like GTPase 6 interacting protein 1.
      
 0.769
ARRDC3
Arrestin domain containing 3.
      
 0.769
APIP
APAF1 interacting protein.
      
 0.574
CLK4
CDC like kinase 4.
      
 0.514
MFSD3
Major facilitator superfamily domain containing 3.
      
 0.513
ADGRV1
Adhesion G protein-coupled receptor V1.
      
 0.512
CWC15
CWC15 spliceosome associated protein homolog.
      
 0.509
ACIN1
Apoptotic chromatin condensation inducer 1.
      
 0.507
CDC14A
Cell division cycle 14A.
      
 0.477
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.