STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP6SUMO specific peptidase 6. (1119 aa)    
Predicted Functional Partners:
SUMO3
Small ubiquitin like modifier 3.
    
 0.982
SUMO1
Small ubiquitin like modifier 1.
    
 0.955
ENSPVAP00000015374
annotation not available
    
0.932
SENP5
SUMO specific peptidase 5.
    
0.932
ZNF638
Zinc finger protein 638.
   
   0.874
SENP1
SUMO specific peptidase 1.
    
0.834
SENP2
SUMO specific peptidase 2.
    
0.834
NFATC2IP
Nuclear factor of activated T cells 2 interacting protein.
    
 0.827
RANGAP1
Ran GTPase activating protein 1.
    
 
 0.764
NIPBL
NIPBL cohesin loading factor.
   
    0.748
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.