STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR6WD repeat domain 6. (1146 aa)    
Predicted Functional Partners:
FTSJ1
FtsJ RNA 2'-O-methyltransferase 1.
   
 
 0.987
UTP15
UTP15 small subunit processome component.
   
    0.920
ENSPVAP00000000058
annotation not available
   
 
 0.896
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.859
NOP56
NOP56 ribonucleoprotein.
   
    0.849
SNU13
Small nuclear ribonucleoprotein 13.
   
    0.821
ENSPVAP00000005563
annotation not available
      
 0.805
TBL2
Transducin beta like 2.
   
  
 0.795
ASB4
Ankyrin repeat and SOCS box containing 4.
    
 
 0.788
PTDSS1
Phosphatidylserine synthase 1.
   
  
 0.777
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.