STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD3THUMP domain containing 3. (504 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
 0.908
ITSN1
Intersectin 1.
    
 0.806
SETD5
SET domain containing 5.
      
 0.778
WASL
WASP like actin nucleation promoting factor.
   
 0.706
WAS
WASP actin nucleation promoting factor.
   
 0.706
ENSPVAP00000007572
annotation not available
    
 0.658
METTL5
Methyltransferase like 5.
   
 
 0.645
TSEN2
tRNA splicing endonuclease subunit 2.
    
   0.606
TRMT112
tRNA methyltransferase subunit 11-2.
    
 
 0.599
NCKIPSD
NCK interacting protein with SH3 domain.
    
 
 0.591
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.