STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAIPTRAF interacting protein. (468 aa)    
Predicted Functional Partners:
FANCD2
FA complementation group D2.
   
 
 0.840
USP37
Ubiquitin specific peptidase 37.
  
 
 
 0.821
LRR1
Leucine rich repeat protein 1.
   
  
 0.797
NEIL3
Nei like DNA glycosylase 3.
   
  
 0.790
FBXO5
F-box protein 5.
   
  
 0.775
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
      
 0.769
CDC45
Cell division cycle 45.
   
  
 0.706
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
      
 0.698
DFFA
DNA fragmentation factor subunit alpha.
      
 0.693
MCM10
Minichromosome maintenance 10 replication initiation factor.
   
  
 0.668
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.