Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACAN | COL1A1 | ENSPVAP00000012213 | ENSPVAP00000008119 | Aggrecan. | Collagen type I alpha 1 chain. | 0.775 |
ACAN | COL1A2 | ENSPVAP00000012213 | ENSPVAP00000008363 | Aggrecan. | Collagen type I alpha 2 chain. | 0.572 |
ACAN | COL3A1 | ENSPVAP00000012213 | ENSPVAP00000005167 | Aggrecan. | Collagen type III alpha 1 chain. | 0.441 |
ACAN | DCN | ENSPVAP00000012213 | ENSPVAP00000013424 | Aggrecan. | Decorin. | 0.848 |
ACAN | FBN1 | ENSPVAP00000012213 | ENSPVAP00000000408 | Aggrecan. | Fibrillin 1. | 0.604 |
ACAN | LUM | ENSPVAP00000012213 | ENSPVAP00000008447 | Aggrecan. | Lumican. | 0.852 |
ACAN | OGN | ENSPVAP00000012213 | ENSPVAP00000009972 | Aggrecan. | Osteoglycin. | 0.716 |
ACAN | SPARC | ENSPVAP00000012213 | ENSPVAP00000007635 | Aggrecan. | Secreted protein acidic and cysteine rich. | 0.532 |
ACAN | TGFB2 | ENSPVAP00000012213 | ENSPVAP00000015331 | Aggrecan. | Transforming growth factor beta 2. | 0.429 |
COL1A1 | ACAN | ENSPVAP00000008119 | ENSPVAP00000012213 | Collagen type I alpha 1 chain. | Aggrecan. | 0.775 |
COL1A1 | COL1A2 | ENSPVAP00000008119 | ENSPVAP00000008363 | Collagen type I alpha 1 chain. | Collagen type I alpha 2 chain. | 0.999 |
COL1A1 | COL3A1 | ENSPVAP00000008119 | ENSPVAP00000005167 | Collagen type I alpha 1 chain. | Collagen type III alpha 1 chain. | 0.999 |
COL1A1 | DCN | ENSPVAP00000008119 | ENSPVAP00000013424 | Collagen type I alpha 1 chain. | Decorin. | 0.814 |
COL1A1 | FBN1 | ENSPVAP00000008119 | ENSPVAP00000000408 | Collagen type I alpha 1 chain. | Fibrillin 1. | 0.808 |
COL1A1 | LUM | ENSPVAP00000008119 | ENSPVAP00000008447 | Collagen type I alpha 1 chain. | Lumican. | 0.846 |
COL1A1 | OGN | ENSPVAP00000008119 | ENSPVAP00000009972 | Collagen type I alpha 1 chain. | Osteoglycin. | 0.521 |
COL1A1 | SPARC | ENSPVAP00000008119 | ENSPVAP00000007635 | Collagen type I alpha 1 chain. | Secreted protein acidic and cysteine rich. | 0.976 |
COL1A1 | TGFB2 | ENSPVAP00000008119 | ENSPVAP00000015331 | Collagen type I alpha 1 chain. | Transforming growth factor beta 2. | 0.556 |
COL1A2 | ACAN | ENSPVAP00000008363 | ENSPVAP00000012213 | Collagen type I alpha 2 chain. | Aggrecan. | 0.572 |
COL1A2 | COL1A1 | ENSPVAP00000008363 | ENSPVAP00000008119 | Collagen type I alpha 2 chain. | Collagen type I alpha 1 chain. | 0.999 |
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