STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCSAMLGerminal center associated signaling and motility like. (136 aa)    
Predicted Functional Partners:
SEZ6L
Seizure related 6 homolog like.
      
 0.769
USH1C
USH1 protein network component harmonin.
      
 0.768
PTPRE
Protein tyrosine phosphatase receptor type E.
      
 0.753
CALHM3
Calcium homeostasis modulator 3.
      
 0.716
SERPINB7
Serpin family B member 7.
      
 0.700
PPFIA2
PTPRF interacting protein alpha 2.
      
 0.606
TMTC2
Transmembrane O-mannosyltransferase targeting cadherins 2.
      
 0.597
LDLRAD3
Low density lipoprotein receptor class A domain containing 3.
      
 0.575
SASH1
SAM and SH3 domain containing 1.
      
 0.572
AGPAT4
1-acylglycerol-3-phosphate O-acyltransferase 4.
      
 0.568
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.