STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN2BUBX domain protein 2B. (323 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.987
ASPSCR1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.983
FAF1
Fas associated factor 1.
    
 0.979
UBXN7
UBX domain protein 7.
    
 
 0.969
VCPIP1
Valosin containing protein interacting protein 1.
    
 
 0.960
UBXN6
UBX domain protein 6.
    
 0.954
UBXN8
UBX domain protein 8.
    
 0.933
PLAA
Phospholipase A2 activating protein.
    
 
 0.904
UBXN2A
UBX domain protein 2A.
  
 
0.903
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.897
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.