STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABARAPGABA type A receptor-associated protein. (66 aa)    
Predicted Functional Partners:
ENSPVAP00000005120
annotation not available
   
 0.992
ATG3
Autophagy related 3.
  
 0.952
ATG7
Autophagy related 7.
   
 0.949
ATG4B
Autophagy related 4B cysteine peptidase.
   
 0.926
ATG4A
Autophagy related 4A cysteine peptidase.
   
 0.919
ATG14
Autophagy related 14.
    
 0.913
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.888
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.887
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.884
SQSTM1
Sequestosome 1.
   
 0.878
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.