STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LITAFLipopolysaccharide induced TNF factor. (229 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.943
ENSPVAP00000002948
annotation not available
     
 0.927
CDIP1
Cell death inducing p53 target 1.
    
 0.812
RPA1
Replication protein A1.
    
 0.764
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.733
CENPT
Centromere protein T.
    
 0.720
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.715
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.705
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.696
RPA2
Replication protein A2.
    
 0.695
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.