STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT2D3SFT2 domain containing 3. (217 aa)    
Predicted Functional Partners:
GOLT1B
Golgi transport 1B.
   
 
 0.796
STX5
Syntaxin 5.
    
 
 0.790
GOLT1A
Golgi transport 1A.
   
 
 0.647
ENSPVAP00000000108
annotation not available
      
 0.643
COG6
Component of oligomeric golgi complex 6.
    
   0.593
ENSPVAP00000012936
annotation not available
    
 
 0.587
ISCA1
Iron-sulfur cluster assembly 1.
      
 0.575
YKT6
YKT6 v-SNARE homolog.
    
 
 0.563
PLCD4
Phospholipase C delta 4.
      
 0.562
TRAPPC3
Trafficking protein particle complex 3.
      
 0.515
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.