STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIN7BLin-7 homolog B, crumbs cell polarity complex component. (207 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.988
RTKN
Rhotekin.
     
 0.939
ENSPVAP00000010751
annotation not available
    
 0.874
MPP1
Membrane palmitoylated protein 1.
    
 0.861
PRDX5
Peroxiredoxin 5.
   
 0.861
MPP2
Membrane palmitoylated protein 2.
    
 0.821
MPP6
Membrane palmitoylated protein 6.
    
 0.821
APBA1
Amyloid beta precursor protein binding family A member 1.
    
 0.812
ENSPVAP00000001866
annotation not available
    
 0.810
CAMK2B
Calcium/calmodulin dependent protein kinase II beta.
    
 0.810
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.