STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCO6Transmembrane and coiled-coil domains 6. (496 aa)    
Predicted Functional Partners:
CSE1L
Chromosome segregation 1 like.
   
 0.819
KPNB1
Karyopherin subunit beta 1.
   
 0.811
TBKBP1
TBK1 binding protein 1.
   
 0.811
RANBP2
RAN binding protein 2.
   
 
 0.687
NUP153
Nucleoporin 153.
    
 
 0.671
NCBP1
Nuclear cap binding protein subunit 1.
    
 
 0.654
GCC2
GRIP and coiled-coil domain containing 2.
   
 
 0.643
RANBP1
RAN binding protein 1.
   
 
 0.643
NUP50
Nucleoporin 50.
   
 
 0.638
NCBP2
Nuclear cap binding protein subunit 2.
    
 
 0.627
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.