STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHYHIPphytanoyl-CoA 2-hydroxylase interacting protein. (327 aa)    
Predicted Functional Partners:
GJD4
Gap junction protein delta 4.
      
 0.567
PHYH
phytanoyl-CoA 2-hydroxylase.
    
 
 0.553
TCF23
Transcription factor 23.
      
 0.552
LIMS2
LIM zinc finger domain containing 2.
      
 0.542
ASB5
Ankyrin repeat and SOCS box containing 5.
    
 
 0.516
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
      
 0.515
PLCL1
Phospholipase C like 1 (inactive).
      
 0.515
ECEL1
Endothelin converting enzyme like 1.
      
 0.514
CIART
Circadian associated repressor of transcription.
      
 0.514
RASL11A
RAS like family 11 member A.
      
 0.512
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.