STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM5Zinc finger SWIM-type containing 5. (1178 aa)    
Predicted Functional Partners:
ZSWIM9
Zinc finger SWIM-type containing 9.
      
 0.769
CUL2
Cullin 2.
     
 0.633
FARP2
FERM, ARH/RhoGEF and pleckstrin domain protein 2.
    
 
 0.588
ELOC
Elongin C.
    
 0.585
LPP
LIM domain containing preferred translocation partner in lipoma.
      
 0.558
ENSPVAP00000010156
annotation not available
    
 0.555
ALX3
ALX homeobox 3.
      
 0.506
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2.
    
 
 0.491
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.491
ENSPVAP00000010748
annotation not available
      
 0.479
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.