STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF20L1PHD finger protein 20 like 1. (1019 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.943
CENPT
Centromere protein T.
    
 0.720
ANKMY2
Ankyrin repeat and MYND domain containing 2.
    
 
 0.711
ARID4B
AT-rich interaction domain 4B.
   
   0.701
LMAN2L
Lectin, mannose binding 2 like.
      
 0.696
GATAD2A
GATA zinc finger domain containing 2A.
    
 
 0.681
ENSPVAP00000014359
annotation not available
      
 0.669
GATAD2B
GATA zinc finger domain containing 2B.
    
 
 0.668
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.666
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
     
 0.655
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.