STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF19ARing finger protein 19A, RBR E3 ubiquitin protein ligase. (734 aa)    
Predicted Functional Partners:
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
 0.815
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.778
ENSPVAP00000015543
annotation not available
    
 0.775
TUBGCP3
Tubulin gamma complex associated protein 3.
   
  
 0.769
PSMC3
Proteasome 26S subunit, ATPase 3.
      
 0.769
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.717
RNF7
Ring finger protein 7.
    
 0.703
SCEL
Sciellin.
    
 
 0.701
RNF216
Ring finger protein 216.
    
 0.693
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.692
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.