STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (280 aa)    
Predicted Functional Partners:
NDNF
Neuron derived neurotrophic factor.
      
 0.771
UTS2B
Urotensin 2B.
      
 0.769
RORB
RAR related orphan receptor B.
      
 0.769
CHODL
Chondrolectin.
     
 0.680
GABRD
Gamma-aminobutyric acid type A receptor delta subunit.
   
  
 0.642
CARTPT
CART prepropeptide.
      
 0.636
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
   
  
 0.631
PARM1
Prostate androgen-regulated mucin-like protein 1.
    
 
 0.625
IL1RAPL2
Interleukin 1 receptor accessory protein like 2.
   
  
 0.618
NPRL2
NPR2 like, GATOR1 complex subunit.
    
 
 0.605
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.