RRAGB protein (Pteropus vampyrus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pteropus vampyrus

NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPVAP00000001658	LAMTOR1	ENSPVAP00000001658	ENSPVAP00000014899	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	0.901
ENSPVAP00000001658	LAMTOR2	ENSPVAP00000001658	ENSPVAP00000009736	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.942
ENSPVAP00000001658	LAMTOR3	ENSPVAP00000001658	ENSPVAP00000016672	annotation not available	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.	0.886
ENSPVAP00000001658	MTOR	ENSPVAP00000001658	ENSPVAP00000013937	annotation not available	Mechanistic target of rapamycin kinase.	0.819
ENSPVAP00000001658	NPRL3	ENSPVAP00000001658	ENSPVAP00000000502	annotation not available	NPR3 like, GATOR1 complex subunit.	0.999
ENSPVAP00000001658	RPTOR	ENSPVAP00000001658	ENSPVAP00000008016	annotation not available	Regulatory associated protein of MTOR complex 1.	0.727
ENSPVAP00000001658	RRAGB	ENSPVAP00000001658	ENSPVAP00000009610	annotation not available	Ras related GTP binding B.	0.986
ENSPVAP00000001658	RRAGC	ENSPVAP00000001658	ENSPVAP00000011635	annotation not available	Ras related GTP binding C.	0.997
ENSPVAP00000001658	RRAGD	ENSPVAP00000001658	ENSPVAP00000000995	annotation not available	Ras related GTP binding D.	0.959
ENSPVAP00000001658	WDR24	ENSPVAP00000001658	ENSPVAP00000012344	annotation not available	WD repeat domain 24.	0.999
LAMTOR1	ENSPVAP00000001658	ENSPVAP00000014899	ENSPVAP00000001658	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	annotation not available	0.901
LAMTOR1	LAMTOR2	ENSPVAP00000014899	ENSPVAP00000009736	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.	0.999
LAMTOR1	LAMTOR3	ENSPVAP00000014899	ENSPVAP00000016672	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.	0.999
LAMTOR1	MTOR	ENSPVAP00000014899	ENSPVAP00000013937	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Mechanistic target of rapamycin kinase.	0.955
LAMTOR1	NPRL3	ENSPVAP00000014899	ENSPVAP00000000502	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	NPR3 like, GATOR1 complex subunit.	0.930
LAMTOR1	RPTOR	ENSPVAP00000014899	ENSPVAP00000008016	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Regulatory associated protein of MTOR complex 1.	0.997
LAMTOR1	RRAGB	ENSPVAP00000014899	ENSPVAP00000009610	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Ras related GTP binding B.	0.990
LAMTOR1	RRAGC	ENSPVAP00000014899	ENSPVAP00000011635	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Ras related GTP binding C.	0.999
LAMTOR1	RRAGD	ENSPVAP00000014899	ENSPVAP00000000995	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	Ras related GTP binding D.	0.999
LAMTOR1	WDR24	ENSPVAP00000014899	ENSPVAP00000012344	Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.	WD repeat domain 24.	0.831