STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBPLipopolysaccharide binding protein. (474 aa)    
Predicted Functional Partners:
LY96
Lymphocyte antigen 96.
     
 0.734
TLR4
Toll like receptor 4.
   
 
 0.728
PRTN3
Proteinase 3.
   
  
 0.642
APOA1
Apolipoprotein A1.
   
 0.629
CD14
CD14 molecule.
   
 
 0.556
ENSPVAP00000009669
annotation not available
   
 
 0.541
LTF
Lactotransferrin.
   
  
 0.537
S100A12
S100 calcium binding protein A12.
   
 
 0.519
APOA4
Apolipoprotein A4.
   
 0.505
APOB
Apolipoprotein B.
     
 0.502
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.