STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM2BLysine demethylase 2B. (1334 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
 0.999
SKP1
S-phase kinase associated protein 1.
   
 0.999
PCGF1
Polycomb group ring finger 1.
   
 0.983
BCORL1
BCL6 corepressor like 1.
   
 0.944
RNF2
Ring finger protein 2.
    
 
 0.940
RYBP
RING1 and YY1 binding protein.
    
 
 0.940
YAF2
YY1 associated factor 2.
    
 
 0.939
ENSPVAP00000001791
annotation not available
    
 
 0.908
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.895
CUL1
Cullin 1.
    
 0.869
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.