STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM2Serine/arginine repetitive matrix 2. (2701 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.994
DHX38
DEAH-box helicase 38.
    
 0.993
CDC40
Cell division cycle 40.
    
 0.993
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.992
SLU7
SLU7 homolog, splicing factor.
    
 0.987
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.986
ENSPVAP00000007408
annotation not available
   
 0.984
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.983
RBM25
RNA binding motif protein 25.
   
 0.980
PRPF6
pre-mRNA processing factor 6.
    
 0.976
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.