STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASIC4Acid sensing ion channel subunit family member 4. (661 aa)    
Predicted Functional Partners:
ASIC3
Acid sensing ion channel subunit 3.
  
  
0.903
ASIC1
Acid sensing ion channel subunit 1.
  
  
0.720
ASIC5
Acid sensing ion channel subunit family member 5.
     
0.713
ASIC2
Acid sensing ion channel subunit 2.
     
0.713
STOML1
Stomatin like 1.
    
 0.704
STOML3
Stomatin like 3.
    
 0.688
FBXO25
F-box protein 25.
    
 
 0.633
STOM
Stomatin.
    
 0.622
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 0.613
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 0.613
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.