STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN10Calpain 10. (715 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
 
 
 0.865
CAST
Calpastatin.
    
 0.847
GCA
Grancalcin.
   
 0.642
PEF1
penta-EF-hand domain containing 1.
   
 0.642
SRI
Sorcin.
   
 0.642
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.610
CLYBL
Citrate lyase beta like.
      
 0.572
LYPLA1
Lysophospholipase 1.
      
 0.559
LRRC52
Leucine rich repeat containing 52.
    
 
 0.538
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
      
 0.511
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.