STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS13AVacuolar protein sorting 13 homolog A. (3157 aa)    
Predicted Functional Partners:
LGALS12
Galectin 12.
   
 
 0.843
VAPA
VAMP associated protein A.
    
 
 0.753
PLA2G15
Phospholipase A2 group XV.
      
 0.718
DCAF17
DDB1 and CUL4 associated factor 17.
      
 0.695
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.692
PSD3
Pleckstrin and Sec7 domain containing 3.
      
 0.619
RNF123
Ring finger protein 123.
    
 
 0.599
ADD2
Adducin 2.
    
 
 0.597
GAK
Cyclin G associated kinase.
    
 
 0.593
TMEM161B
Transmembrane protein 161B.
      
 0.578
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.