STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPGRIP1LRPGRIP1 like. (1240 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin 4.
    
 0.996
NPHP1
Nephrocystin 1.
    
 0.992
TMEM67
Transmembrane protein 67.
   
  
 0.948
TMEM216
Transmembrane protein 216.
   
  
 0.937
IFT88
Intraflagellar transport 88.
   
  
 0.823
ENSPVAP00000013852
annotation not available
    
 
 0.822
PSMD3
Proteasome 26S subunit, non-ATPase 3.
    
 
 0.809
AHI1
Abelson helper integration site 1.
     
 0.809
TCTN1
Tectonic family member 1.
      
 0.808
TMEM237
Transmembrane protein 237.
    
 0.806
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.