STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf49Chromosome 5 open reading frame 49. (91 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.970
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.829
ENSPVAP00000000982
annotation not available
   
  
 0.809
ENKUR
Enkurin, TRPC channel interacting protein.
    
 
 0.802
IFT57
Intraflagellar transport 57.
      
 0.800
ARMC3
Armadillo repeat containing 3.
   
  
 0.799
CCDC170
Coiled-coil domain containing 170.
      
 0.776
SPACA9
Sperm acrosome associated 9.
    
 
 0.679
C1orf194
Chromosome 1 open reading frame 194.
   
   0.673
CFAP161
Cilia and flagella associated protein 161.
   
 
 0.672
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.