STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE6CPhosphodiesterase 6C. (858 aa)    
Predicted Functional Partners:
GNAT2
G protein subunit alpha transducin 2.
   
 0.941
ENSPVAP00000006968
annotation not available
   
 
 0.938
GUCY2F
Guanylate cyclase 2F, retinal.
   
 0.936
GUCY2D
Guanylate cyclase 2D, retinal.
   
 0.936
GUCY2C
Guanylate cyclase 2C.
    
 0.920
ADCY6
Adenylate cyclase 6.
    
 0.918
ADCY5
Adenylate cyclase 5.
    
 0.918
NPR2
Natriuretic peptide receptor 2.
    
 0.909
NPR1
Natriuretic peptide receptor 1.
    
 0.909
PTRHD1
peptidyl-tRNA hydrolase domain containing 1.
    
 0.908
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.