STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCNN1GSodium channel epithelial 1 gamma subunit. (651 aa)    
Predicted Functional Partners:
SCNN1B
Sodium channel epithelial 1 beta subunit.
  
0.998
SCNN1A
Sodium channel epithelial 1 alpha subunit.
  
0.981
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 0.968
ENSPVAP00000000959
annotation not available
  
0.938
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 0.933
SGK1
Serum/glucocorticoid regulated kinase 1.
    
 0.768
NIM1K
NIM1 serine/threonine protein kinase.
      
 0.735
HSD11B2
Hydroxysteroid 11-beta dehydrogenase 2.
      
 0.733
ATP13A3
ATPase 13A3.
      
 0.700
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
  0.677
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.