STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIB1Mindbomb E3 ubiquitin protein ligase 1. (1005 aa)    
Predicted Functional Partners:
NHS
NHS actin remodeling regulator.
   
 0.822
TRIP11
Thyroid hormone receptor interactor 11.
    
 0.802
ZMYM4
Zinc finger MYM-type containing 4.
   
  0.734
YWHAH
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta.
    
 0.685
ZWILCH
Zwilch kinetochore protein.
      
 0.655
CYLD
CYLD lysine 63 deubiquitinase.
    
  0.635
IFT81
Intraflagellar transport 81.
    
 0.633
CASP9
Caspase 9.
    
  0.631
JAG1
Jagged canonical Notch ligand 1.
   
 0.623
PCM1
Pericentriolar material 1.
    
 
 0.619
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.