STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDL3Rhomboid like 3. (403 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.854
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
  
 0.740
MYO3A
Myosin IIIA.
    
 0.715
MYO3B
Myosin IIIB.
    
 0.715
WDR90
WD repeat domain 90.
    
 
 0.709
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
   
 0.694
CAPN12
Calpain 12.
   
 
 0.675
DCLK1
Doublecortin like kinase 1.
   
 0.672
RHBDD3
Rhomboid domain containing 3.
      
 0.669
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.647
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.