STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APTXAprataxin. (354 aa)    
Predicted Functional Partners:
XRCC1
X-ray repair cross complementing 1.
    
 
 0.907
PARP2
poly(ADP-ribose) polymerase 2.
   
 
 0.859
PNKP
Polynucleotide kinase 3'-phosphatase.
    
 
 0.789
APLF
Aprataxin and PNKP like factor.
      
 0.771
TDP1
tyrosyl-DNA phosphodiesterase 1.
    
 
 0.766
LIG4
DNA ligase 4.
   
 
 0.748
PARP1
poly(ADP-ribose) polymerase 1.
   
 
 0.715
COQ4
Coenzyme Q4.
      
 0.693
PDSS1
Decaprenyl diphosphate synthase subunit 1.
      
 0.693
RAE1
Ribonucleic acid export 1.
   
    0.678
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.