STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf116Chromosome 1 open reading frame 116. (485 aa)    
Predicted Functional Partners:
INIP
INTS3 and NABP interacting protein.
      
 0.769
NKX3-1
NK3 homeobox 1.
      
 0.769
HOMER1
Homer scaffold protein 1.
    
   0.643
TRIM7
Tripartite motif containing 7.
      
 0.621
PGM2L1
Phosphoglucomutase 2 like 1.
      
 0.591
ENSPVAP00000014583
annotation not available
    
   0.591
MGAT4B
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
      
 0.589
C9orf152
Chromosome 9 open reading frame 152.
      
 0.581
POMK
Protein O-mannose kinase.
      
 0.575
OS9
OS9 endoplasmic reticulum lectin.
      
 0.570
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.