STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVAP00000011003annotation not available (314 aa)    
Predicted Functional Partners:
RDH10
Retinol dehydrogenase 10.
   
 
 0.941
RLBP1
Retinaldehyde binding protein 1.
    
 0.926
LRAT
Lecithin retinol acyltransferase.
     
 0.924
ALDH1A3
Aldehyde dehydrogenase 1 family member A3.
  
 0.919
ALDH1A2
Aldehyde dehydrogenase 1 family member A2.
  
 0.897
RDH8
Retinol dehydrogenase 8.
   
 
 0.893
ALDH1A1
Aldehyde dehydrogenase 1 family member A1.
  
 0.886
CYP26A1
Cytochrome P450 family 26 subfamily A member 1.
   
 
 0.885
DGAT1
Diacylglycerol O-acyltransferase 1.
   
 
 0.872
ENSPVAP00000010915
annotation not available
     
 0.871
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.