STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEFB134Defensin beta 134. (66 aa)    
Predicted Functional Partners:
DEFB114
Defensin beta 114.
     
 0.809
DEFB127
Defensin beta 127.
     
 0.809
ENSPVAP00000002183
annotation not available
     
 0.746
DEFB124
Defensin beta 124.
     
 0.737
DEFB110
Defensin beta 110.
     
 0.703
MTMR9
Myotubularin related protein 9.
      
 0.650
ENSPVAP00000015066
annotation not available
     
 0.645
DEFB129
Defensin beta 129.
     
 0.629
QSER1
Glutamine and serine rich 1.
      
 0.553
DEFB136
Defensin beta 136.
     
 0.529
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.