STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASC4Cancer susceptibility 4. (327 aa)    
Predicted Functional Partners:
CASC3
CASC3 exon junction complex subunit.
      
 0.774
TBC1D25
TBC1 domain family member 25.
      
 0.693
TEP1
Telomerase associated protein 1.
    
 0.619
RHOT1
Ras homolog family member T1.
    
 
 0.616
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 0.604
FGFR1OP
FGFR1 oncogene partner.
    
 
 0.582
C1QC
Complement C1q C chain.
    
  0.568
SDCCAG8
Serologically defined colon cancer antigen 8.
    
 0.554
KCNU1
Potassium calcium-activated channel subfamily U member 1.
    
 
 0.545
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
    
 
 0.541
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.