STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNCAIPSynuclein alpha interacting protein. (1013 aa)    
Predicted Functional Partners:
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 0.983
SNCA
Synuclein alpha.
    
 0.974
SH3BP5L
SH3 binding domain protein 5 like.
    
 
 0.814
SNCG
Synuclein gamma.
    
 0.809
CLSTN3
Calsyntenin 3.
      
 0.769
TELO2
Telomere maintenance 2.
      
 0.769
SIAH2
Siah E3 ubiquitin protein ligase 2.
    
 0.735
NUB1
Negative regulator of ubiquitin like proteins 1.
    
 0.732
FAM170A
Family with sequence similarity 170 member A.
    
 
 0.715
CDH18
Cadherin 18.
    
 0.682
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.