STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP47Ubiquitin specific peptidase 47. (1361 aa)    
Predicted Functional Partners:
POLB
DNA polymerase beta.
    
 0.970
RRP8
Ribosomal RNA processing 8.
      
 0.775
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.725
TRIP12
Thyroid hormone receptor interactor 12.
   
  
 0.718
POLL
DNA polymerase lambda.
    
 0.664
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.635
CEP57
Centrosomal protein 57.
      
 0.631
DNTT
DNA nucleotidylexotransferase.
    
 0.616
POLM
DNA polymerase mu.
    
 0.616
ENKD1
Enkurin domain containing 1.
    
 0.616
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.