STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADARB1Adenosine deaminase RNA specific B1. (641 aa)    
Predicted Functional Partners:
ALYREF
Aly/REF export factor.
      
 0.751
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
   0.587
KCTD2
Potassium channel tetramerization domain containing 2.
    
   0.587
C19orf54
Chromosome 19 open reading frame 54.
      
 0.575
SCAF4
SR-related CTD associated factor 4.
      
 0.566
C9orf72
C9orf72-SMCR8 complex subunit.
      
 0.565
RASSF3
Ras association domain family member 3.
      
 0.543
ENSPVAP00000000487
annotation not available
    
 
 0.535
RGS7BP
Regulator of G protein signaling 7 binding protein.
      
 0.517
ENSPVAP00000011107
annotation not available
      
 0.516
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.