STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD18RAD18 E3 ubiquitin protein ligase. (492 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen.
   
 0.994
HLTF
Helicase like transcription factor.
   
 0.974
UBE2A
Ubiquitin conjugating enzyme E2 A.
    
 0.968
UBE2B
Ubiquitin conjugating enzyme E2 B.
    
 0.965
UBB
Ubiquitin B.
    
 0.945
ENSPVAP00000015543
annotation not available
    
 0.943
RAD51
RAD51 recombinase.
   
 
 0.942
ENSPVAP00000006590
annotation not available
    
 0.942
FANCM
FA complementation group M.
   
 
 0.937
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.929
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.