STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCED1BPC-esterase domain containing 1B. (436 aa)    
Predicted Functional Partners:
PDZRN4
PDZ domain containing ring finger 4.
      
 0.552
MACROH2A2
macroH2A.2 histone.
      
 0.546
ENSPVAP00000008359
annotation not available
      
 0.512
STK32B
Serine/threonine kinase 32B.
      
 0.511
EXOC6B
Exocyst complex component 6B.
      
 0.505
MPZL3
Myelin protein zero like 3.
      
 0.502
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
      
 0.493
MACROH2A1
macroH2A.1 histone.
      
 0.430
MTMR9
Myotubularin related protein 9.
      
 0.428
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.