STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBLIFCobalamin binding intrinsic factor. (417 aa)    
Predicted Functional Partners:
CUBN
Cubilin.
    
 0.996
TCN1
Transcobalamin 1.
     
0.883
ATP4B
ATPase H+/K+ transporting subunit beta.
   
  
 0.867
CDCP2
CUB domain containing protein 2.
    
 0.817
TFF2
Trefoil factor 2.
   
  
 0.805
VEGFB
Vascular endothelial growth factor B.
      
 0.737
PCOLCE
Procollagen C-endopeptidase enhancer.
    
 0.731
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
    
 0.731
TCN2
Transcobalamin 2.
  
  
0.653
UFM1
Ubiquitin fold modifier 1.
      
 0.632
Your Current Organism:
Pteropus vampyrus
NCBI taxonomy Id: 132908
Other names: P. vampyrus, large flying fox
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.